21. Human Population Genetics Laboratory - Home Welcome to the Human population genetics Laboratory (HPGL). We are located inthe Department of Genetics at the Stanford University School of Medicine. http://hpgl.stanford.edu/

PERSONNEL PROJECTS PUBLICATIONS LINKS Welcome to the Human Population Genetics Laboratory (HPGL). We are located in the Department of Genetics at the Stanford University School of Medicine Human Population Genetics Laboratory Department of Genetics School of Medicine Stanford University Stanford, California 94305-5120 United States of America 650.723.7959 (voice) 650.498.6869 (facsimile) http://hpgl.stanford.edu/ info@hpgl.stanford.edu Comments and question to info@hpgl.stanford.edu Stanford University unless noted otherwise.

22. Human Population Genetics Laboratory - Publications A., Ismail, M., Hammer, MF, CavalliSforza, LL, Underhill, PA Genomic Diversity,Applications in Human population genetics, 1997, chapter 7, pages 83-90 (pdf) http://hpgl.stanford.edu/publications.html

HOME PERSONNEL PROJECTS LINKS (Listed in order of year, then publication name.) Cruciani, F., Santolamazza, P., Shen, P., Macaulay, V., Moral, P., Olckers, A., Modiano, D., Destro-Bisol, G., Holmes, S., Coia, V., Wallace, D. C., Oefner, P. J., Torroni, A., Cavalli-Sforza, L. L., Scozzari, R., Underhill, P. A. American Journal of Human Genetics , 2002, volume 70, number 5, pages 1197-1214 pdf Lell, J. T., Sukernik, R. I., Starikovskaya, Y. B., Su, B., Jin, L., Schurr, T. G., Underhill, P. A., Wallace, D. C. American Journal of Human Genetics , 2002, volume 70, pages 192-206 pdf Semino, O., Santachiara-Benerecetti, A. S., Falaschi, F., Cavalli-Sforza, L. L., Underhill, P. A. American Journal of Human Genetics , 2002, volume 70, pages 265-268 pdf King, R., Underhill, P. A. Antiquity , 2002, volume 76, pages 704-714 pdf Thangaraj, K., Singh, L., Reddy, A. G., Rao, V. R., Sehgal, S. C., Underhill, P. A., Pierson, M., Frame, I. G., Hagelberg, E. Current Biology , 2002, pages 1-18 pdf Passarino, G., Cavalleri, G. L., Lin, A. A., Cavalli-Sforza, L. L., Borresen-Dale, A., Underhill, P. A. European Journal of Human Genetics , 2002, volume 10, pages 521-529 pdf Mountain, J. L., Knight, A., Jobin, M., Gignoux, C., Miller, A., Lin, A. A., Underhill, P. A.

23. Population Genetics (GenCB 511) population genetics (GenCB 511) Fall, 1998. 89, Discussion 2. Transposableelements good or bad? Molecular population genetics. http://www.wsu.edu/~mmorgan/gencb511f98/

Population Genetics (GenCB 511) Fall, 1998 Dr. Martin Morgan Department of Botany Department of Washington State University Pullman, WA 99164-4238 email: mmorgan@wsu.edu Class schedule Evaluation Text ... Related Courses Class schedule Links in the class schedule lead to lecture notes. The notes are posted at the start of the week. On each page there's a link to a 'PDF' version that prints out well. To view and print PDF files, your computer requires Adobe Acrobat Reader Week Topics Foundations (10 lectures + 5 problem sets) Syllabus Problem set 1 Introduction, math and statistics . Frequency, mean (arithmetic, geometric, harmonic), variance, covariance. Probability (or, conditional, and, independent). Iteration, differentiation, integration. Variation and mutation . Allelic and DNA sequence variation. Mutation. Problem set 2 Mating . Hardy Weinberg. Inbreeding , identity by descent, and identity in state. Linkage disequilibrium. Problem set 3 Selection . Relative fitness. Classical models (directional; over- and underdominance, mutation-selection balance). Covariance and Fisher's fundamental theorem. Problem set 4 Drift . Expected heterozygosity, divergence and fixation. Coalescent. Effective population size.

24. Population Genetics (Biol 519) http://www.wsu.edu/~mmorgan/biol519f00/

25. OMIM ENTRY 249100 Includes description, features, sections about inheritance factor, mappings of the genes, molecular genetics, pathogenesis, diagnosis, clinical management and population genetics. http://www.ncbi.nlm.nih.gov/htbin-post/Omim/dispmim?249100

26. ThinkQuest Library Of Entries population genetics. The more genes two animals have in common, the closerthey are related (not by blood, but by evolution) to one another. http://library.thinkquest.org/19037/population.html

Welcome to the ThinkQuest Internet Challenge of Entries The web site you have requested, The Gene School , is one of over 4000 student created entries in our Library. Before using our Library, please be sure that you have read and agreed to our To learn more about ThinkQuest. You can browse other ThinkQuest Library Entries To proceed to The Gene School click here Back to the Previous Page The Site you have Requested ... The Gene School click here to view this site A ThinkQuest Internet Challenge 1998 Entry Click image for the Site Languages : Site Desciption This is the place to study the science of genetics. Learn about the foundation of genetics starting with Robert Hooks' discovery of cells in 1655. Read about Gregor Mendel, the father of genetics. Learn the basics of genetics including DNA replication, cell division, and protein synthesis. Discover why creating dinosaurslike in the movie Jurassic Parkis not possible. There's an impressive glossary, experiments, quizzes, games, polls, and links for teachers. Students Dan Mark Morris Library WA, United States

27. Population Genetics And Diabetes population genetics and Diabetes. return to top. Ethnicity and PopulationGenetics. Dr. Paul Kraemer of the Los Alamos National Laboratory said. http://www.nmsu.edu/~molbio/diabetes/population.html

Population Genetics and Diabetes Diabetes in Human Populations Defining Human Populations Ethnicity and Population Genetics Measuring Human Genetic Polymorphism This document was developed by NMSU staff from a presentation made by Drs. Paul Kraemer and P. Scott White, Los Alamos National Laboratory, August 1997 at the workshop "The Human Genome Project: Impact on the Prevalence of Diabetes". Diabetes in Human Populations "It has often been said that 'we don't inherit genes, we inherit chromosomes,'" said Dr. Kraemer. Researchers hope that by identifying certain genetic markers with certain ethnic groups, they will gain an insight into the genetic basis of disease and why certain conditions are more prevalent in certain populations. Many scientists believe that you can't change a single base pair anywhere in the genome without having some influence on the body. There is a higher incidence of diabetes among Native Americans (especially Native Americans from the Southwest) and Hispanic Americans than among the population in general. Whenever a particular group of people shows a predilection towards any disease, a genetic basis for the disease is suspected. [ Yearbook of Physical Anthropology 27:153-178 (1984) Diabetes has a genetic component, but not one that, on the molecular level, is obvious or well-defined. When talking about a complex disease like diabetes, researchers have to bring in ethnology and social issues. The study of diabetes can't be limited to the study of molecules - scientists must also investigate populations. One ethnic group that has been the focus of diabetes studies is the Native American Pima tribe of Arizona. [

28. Plant Pathology - ETH Zürich Research on biocontrol, perennial and annual crops, and population genetics. Contains list of people, publications, and related links. Zurich, Switzerland. http://www.pa.ipw.agrl.ethz.ch/

To fully enjoy our pages you should use a browser able to display frames!! Best experienced with People Welcome to the Plant pathology group of the Swiss Federal Institute of Technology in Zürich Our address Plant Pathology group ETH Zentrum / LFW Universitätstrasse 2 CH-8092 Zürich (Switzerland) Fax: +41 (1) 632 11 08 Administration Mrs. Ulrike Rosenberger Phone: +41 (1) 632 38 48 e-mail: Ulrike.Rosenberger@ipw.agrl.ethz.ch Research Seminars Virtual Classroom Internal pages Fun Guest pages Links Weekly stats What's new ETH -Zürich Institute of Plant Sciences You are visitor since Oct 22, 1997 Last update Feb, 1998. Webmaster

29. Population Genetics population genetics by Knud Christensen. Division of Animal Genetics.Contents. Chapter 1996. Download population genetics, Pdf file. http://www.kursus.kvl.dk/shares/vetgen/_Popgen/genetics/genetik.htm

Population genetics by Knud Christensen Division of Animal Genetics Contents Chapter 1. Introduction, quantitative versus qualitative (Mendelian) genetics Chapter 2. Hardy-Weinberg law for gene frequency stability in large populations Chapter 3. Deviations from Hardy-Weinberg equilibrium Chapter 4. Relationship and inbreeding Chapter 5. Test of simple genetic hypotheses, experimental or field data Chapter 6. Definition of quantitative traits, breeding values and heritability Chapter 7. Estimation of breeding values Chapter 8. Genetic changes by selection Chapter 9. Inbreeding, crossing and bred structure Chapter 10. Chromosomes and chromosome aberrations Chapter 11. Genetics of hair and coat colour in mammals (under construction) Chapter 12. Estimation- and bio-technology and disease resistance Chapter 13. Exercises and solutions, in Danish Chapter 14. Genetic calculations, applets and other programs Chapter 15. Input to genetic discussion club or former input Introduction The present genetics notes are produced as a substitute for ' Veterinary Genetics ' by FW.Nicolas, Oxford University Press, 1989. This book was not available after 1995.

30. Danmarks Fiskeriundersøgelser, Afd. For Ferskvandsfiskeri Research in ecology, management, evolution and population genetics of fishes. Special interests include lake ecosystems, salmonids, and the European eel. http://www.dfu.min.dk/ffi

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31. Evolution Evolution and population genetics. Table of ContentsClick on subject area to access references. http://www.hoflink.com/~house/evolution.html

Evolution and Population Genetics Table of Contents Click on subject area to access references Evolution: and Science Teaching Evidence of Evolution Evolution, Theories, Concepts Fossil Records ... Taxonomy, Phylogenetics Basics, Introductions, Hyperlinks Creationism http://www.talkorigins.org/origins/faqs-debates.html Creationism: Arguments Against http://www.talkorigins.org/origins/faqs-creationists.html Darwin's Obituary http://www.accessexcellence.org/AE/AEPC/WWC/1995/darwin.html Evolution II http://www.pbs.org/wgbh/evolution/ Evolution III http://www.nap.edu/readingroom/books/evolution98/app-c.html Evolution IV http://www.pbs.org/wgbh/evolution/index.html Evolution Archive Index http://www.talkorigins.org/origins/faqs-index.html Evolution Archives: Must Read Files http://www.talkorigins.org/origins/faqs-mustread.html Evolution Articles: Human http://www.antiquityofman.com/Human_evolution_articles.html Evolution and Asexual Reproduction http://www.pbs.org/wgbh/evolution/library/01/5/l_015_01.html Evolutionary Biology: Introduction http://www.talkorigins.org/faqs/faq-intro-to-biology.html

32. AN: Description One of the oldest American journals still published after 150 years. Includes ecology, population genetics, and populative research. http://www.journals.uchicago.edu/AN/brief.html

Since its inception in 1867, The American Naturalist has maintained its position as one of the world's most renowned, peer-reviewed publications in ecology, evolution, and population and integrative biology research. While addressing topics in community and ecosystem dynamics, evolution of sex and mating systems, organismal adaptation, and genetic aspects of evolution, AN emphasizes sophisticated methodologies and innovative theoretical synthesesall in an effort to advance the knowledge of organic evolution and other broad biological principles. Frequency: monthly. Two volumes/year; six issues/volume. Volume 161 begins January 2003. ISSN: 0003-0147. 145 pages/issue. Articles that appear in The American Naturalist are indexed in the following abstracting and indexing services: Go to: AN Homepage Journals Division Homepage

33. Population Genetics Web Pages Human Biology population genetics Web Pages. Hardy Weinberg Equation of PopulationGenetics; Direct Allele Frequency Calculation (codominant trait); http://www.people.virginia.edu/~rjh9u/popgenes.html

Human Biology: Population Genetics Web Pages Hardy Weinberg Equation of Population Genetics Direct Allele Frequency Calculation (co-dominant trait) Indirect Allele Frequency Calculation (recessive trait) H-W Applied to 3 Alleles at a Gene Table of Simple Genotype Frequencies Graphic Form H-W Calculation Spreadsheet (requires a plug-in) Using H-W to Determine Dominant or Recessive MN Blood Group and Hardy Weinberg MNSs Allele Frequencies PKU and CF Frequencies ... Lactose Intolerance Frequencies Class Experiment on Hardy-Weinberg Fall, 1995 Fall, 1996 Fall, 1997 Fall, 1998 ... Sickle-Cell Hemoglobin This document maintained by Robert J. Huskey Last updated on October 13, 1998.

34. DCEG -- LPG Homepage http://www-dceg.ims.nci.nih.gov/hgp/lhg/index.html

[an error occurred while processing this directive] [an error occurred while processing this directive] Laboratory of Population Genetics Dr. Kenneth H. Buetow, Chief The Laboratory of Population Genetics engages in laboratory research with clinicians and epidemiologists to investigate genetic determinants of cancer in human populations; undertakes interdisciplinary studies of populations, families, and individuals at high risk of cancer to identify genetic and other mechanisms associated with risk; maps genes affect or a cancer risk and analyzes relevant DNA chromosomal fragments; clones genes affecting cancer risk and characterizes their expressed products; elucidates the functions of cancer susceptibility genes and mechanism of action. Personnel Function Statement Address Last updated: 10/01/98.

35. Mathematical Methods Of Population Genetics Mathematical Methods of population genetics. This approximation providesa nontrivial and effective method of population genetics. http://pespmc1.vub.ac.be/MATHMPG.html

Mathematical Methods of Population Genetics The mathematical methods of population genetics theory characterize quantitatively the gene distribution dynamics in evolving populations [1-3]. There are two types of models: deterministic and stochastic. Deterministic models are based on the approximation of an infinitely large population size. In this case the fluctuations of gene frequencies (in a gene distribution) can be neglected and the population dynamics can be described in terms of the mean gene frequencies. The stochastic models describe the probabilistic processes in finite size populations. Here we review very briefly the main equations and mathematical methods of population genetics by considering the most representative examples. Deterministic models Let's consider a population of diploid organisms with several alleles A A A K in some locus . We assume that the organism fitness is determined mainly by the considered locus. Designating the number of organisms and the fitness of the gene pair A i A j by n ij and W ij , respectively, we can introduce the genotype and gene frequencies P ij and P i , as well as the mean gene fitnesses W i in accordance with the expressions [1,2,4]:

36. Population Genetics population genetics. Purpose Online Mendelian Inheritance in Man. Genotype/Phenotypechart. The Evolution and population genetics Educational Database. http://www.gsu.edu/~mstnrhx/traits2.htm

Population Genetics Purpose: What percentage of a population have inherited traits such as attached earlobes, widow's peak, and hitch-hiker's thumb? Do the percentages your class post in this collaborative project display the expected genetic statistics? This project is designed by Science Educators from Georgia State University who realize the need to collaboratively collect and analyze scientific data on a broader scope. The particpants may be science educators, or educators from other disciplines...since we all have inherited traits that are recognizeable easily described, and interesting to analyze. Procedure: We will observe and compile data on: Attached Ear lobes Cheek Dimples Tongue Curling Hitch Hiker's Thumb ... Cleft Chin Handclasping Widow's peak Right or Left Handed We will use the Inherited Traits Worksheet to record our observations in pairs, and then compile data for groups of ten. We will then post our data on the CLEO Online Collaborative Project.

37. Www.otago.ac.nz/zoology/ Teaches and researches in several interrelated areas animal evolution, aquatic ecology, behavioural ecology, conservation biology, environmental physiology, neurobiology, population genetics and wildlife management. Information on undergraduate and postgraduate study, staff, research, publications, facilities and Te Roopu. http://www.otago.ac.nz/zoology/

About l Undergraduate l Postgraduate l Staff l Research l Te Roopu l HelpLine l Home Click Pick Contact Us Today's featured staff member... Building progress... webmaster

38. Population Genetics population genetics. Inherited Traits Worksheet. Pair Data Trait, You, Your Partner. .. Do you have Cheek Dimples? -. -. Go Back to population genetics Homepage. http://www.gsu.edu/~mstnrhx/worksheet.htm

Population Genetics Inherited Traits Worksheet Pair Data Trait You Your Partner YES NO YES NO Are you Female Are you Right Handed Do you handclasp with your right thumb on top? Do you have Attached Ear lobes Can you roll your tongue Do you have a Widow's Peak Do you have a Cleft Chin Do you have a Hitch Hiker's Thumb Do you have Cheek Dimples Group Data Total Number of Participants in your group: Trait Group Results YES NO Are you Female Are you Right Handed Do you handclasp with your right thumb on top? Do you have Attached Ear lobes Can you roll your tongue Do you have a Widow's Peak Do you have a Cleft Chin Do you have a Hitch Hiker's Thumb Do you have Cheek Dimples Go Back to Population Genetics Homepage

39. Computational And Molecular Population Genetics Lab - Home Page population genetics, Home Department of Biology Zoological Institute population genetics. Divisionof population genetics. Baltzerstrasse 6 3012 Bern Switzerland. http://www.cmpg.unibe.ch/popgen.htm

Zoological Institute Search Contact Impressum Population Genetics Home Department of Biology Zoological Institute Population Genetics ... Teaching Services Events Links Intranet Webmaster Version 01 Apr 2003 Division of Population Genetics Baltzerstrasse 6 3012 Bern Switzerland Fax: +41 31 631 48 88 Tel. secr. : +41 31 631 45 11 How to find us

40. Publications:Molecular Evolution & Population Genetics Molecular Evolution population genetics. Available for Downloading/Viewing.Ancestral inference in population genetics Authors RC http://www-hto.usc.edu/papers/abstracts/lists/molecularEvolution.html

Available for Downloading/Viewing Ancestral inference in population genetics Calibrating the Clock: Using stochastic processes to measure the Rate of Evolution A Central Limit Theorem for Parsimony Length of Trees Authors: Mike Steel, Larry Goldstein, Michael S. Waterman Coalescents and Genealogical Structure Under Neutrality Computational Methods for the Coalescent The distribution of rare alleles The Ewens Sampling Formula Markov chain Monte Carlo in population genetics A Mathematical Analysis of in Vitro Authors: Fengzhu Sun, David Galas, Michael S. Waterman The Polymerase Chain Reaction and Branching Processes Author: Fengzhu Sun Sampling Theory for Neutral Alleles in a Varying Environment Simulating probability distributions in the coalescent Unrooted genealogical tree probabilities in the infinitely-many-sites model Whole Genome Amplification of Single Cells: Mathematical Analysis of PEP and Tagged PCR Authors: Fengzhu Sun, Norman Arnheim, Michael S. Waterman Previous Level USC Computational Biology Home Page http://www-hto.usc.edu/papers/abstracts/lists/molecularEvolution.html

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